Set the reference genome

Choosing a default reference saves you a step on every run. Don't worry about getting it perfect — you can override it for any single pipeline later.

1

Open Settings and select Reference genome. This only sets the default; individual runs can still use a different build.

Open Settings and select Reference genome. This only sets the default; individual runs can still use a different build.
2

Pick the build you use most. GRCh38 is a solid default if you're unsure.

Pick the build you use most. GRCh38 is a solid default if you're unsure.
3

Decide where it applies. New pipelines only keeps your existing runs exactly as they are.

Decide where it applies. New pipelines only keeps your existing runs exactly as they are.
4

Click Save default. That's it — future runs will use this automatically, and you can change it here whenever you need.

Click Save default. That's it — future runs will use this automatically, and you can change it here whenever you need.